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= [[File:biocase-logo.jpg|BioCASE Monitor|link=]] BioCASe Monitor 2.0 Administrator Manual = thomas.pfuhl@mfn-berlin.de, Oct 2015, last updated April 2016 ----- == User Registration, Authentication & Rights: == * every administrator needs to be registered: username, password, full name, email address * the administrator's rights are individually set for each provider : crud (create, read, update, delete) ** no access: ---- ** read only: -r-- ** '''read+update: -ru-''' ** crud : crud == Typical Workflow == # login # select Provider # edit the Provider's Main Metadata # edit Data Sources and Data Sets # edit Useful Links # logout === Login === * login [[File:glyphicons-387-log-in.png|link=]] * type in username and password * select provider === Main Metadata === * edit the provider's Main Metadata === Count Concepts === * example: ''/DataSet/Units/Unit/MultiMediaObjects/MultiMediaObject/FileURI'' * modify a concept: autocompletion from all concepts defined in ABCD2 * [[File:glyphicons-187-move.png|link=]] sort: move a concept up and down, using the handle * [[File:glyphicons-415-disk-save.png|link=]] save * [[File:glyphicons-433-plus.png|link=]] add * [[File:glyphicons-208-remove-2.png|delete|link=]] delete === Data Source Access Points (DSAs) === * Data Sources are presented in tabs: a tab for each data source, one data source visible * operations: '''add''', '''delete''', '''save''' * edit required fields ** status: active/inactive ** data-source: select select a specific Data Source in the dropdown list ** title: type a human readable full title ** data-set: select a specific Data Set in the dropdown list ** landing-page: select type of landingpge: *** automatically generated: this is the default landingpage, based on a scan request for the concept ''/DataSets/DataSet/Units/Unit/MultiMediaObjects/MultiMediaObject/FileURI''. *** user-defined URL: enter an URL * for advanced users only: ** filter is applied '''as is''' (not validated) to the request sent to the pywrapper === Useful Links === * add an arbitrary list of links ** a link is a fqdn (full qualified domain name) and should be one of the following types: *** BioCASe Query Tool *** BioCASe Archive *** GBIF *** Europaeana *** Deutsche Digitale Bibliothek *** GeoCASe *** BiNHum *** Pangaea *** GFBio ** example: ''http://www.gbif.org/dataset/71f03224-f762-11e1-a439-00145eb45e9a'' (GBIF) ** special case: '''BioCASe Archive''' *** recommendation: BioCASe Archives should always be provided and placed first. In the case of multiple Archives, one of them can be marked as "latest". *** remark: please note that an URL for a BioCASe Archive is arbitrary, i.e. it need not to be hosted on the biowikifarm. === Logout === * [[File:glyphicons-388-log-out.png|link=]] ----- == Webservices == output: JSON === Direct Call === You have to supply some of the following GET-Parameters: provider (provider ID), name (provider Name), dsa (Data Source Access Point), url (pywrapper) * [http://bms.gfbio.org/services/providers/ http://bms.gfbio.org/services/providers/] (gets Providers) * [http://bms.gfbio.org/services/providers/?provider=1 http://bms.gfbio.org/services/providers/?provider=1] * [http://bms.gfbio.org/services/providers/?name=SNSB http://bms.gfbio.org/services/providers/?name=SNSB] * [http://bms.gfbio.org/services/data-sources/ http://bms.gfbio.org/services/data-sources/] (gets DSA Points) * [http://bms.gfbio.org/services/data-sources/?provider=1 http://bms.gfbio.org/services/data-sources/?provider=1] * [http://bms.gfbio.org/services/useful-links/?provider=1 http://bms.gfbio.org/services/useful-links/?provider=1] (gets Useful Links) * [http://bms.gfbio.org/services/useful-links/?provider=1&dsa=1 http://bms.gfbio.org/services/useful-links/?provider=1&dsa=1] * [http://bms.gfbio.org/services/xml-archives/?provider=1 http://bms.gfbio.org/services/xml-archives/?provider=1] (gets XML Archives) * [http://bms.gfbio.org/services/capabilities/?localId=0&output=json&url=http%3A%2F%2Fww3.bgbm.org%2Fbiocase%2Fpywrapper.cgi%3Fdsa%3DHerbar http://bms.gfbio.org/services/capabilities/?localId=0&url=http%3A%2F%2Fww3.bgbm.org%2Fbiocase%2Fpywrapper.cgi%3Fdsa%3DHerbar] (gets Capabilities, localId is a dummy value) === GUI === * [http://bms.gfbio.org/services/ http://bms.gfbio.org/services/] === BioDiversity catalogue === These Webservices are registered in the BioDiversity Catalogue: https://www.biodiversitycatalogue.org/services/101

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